Publications

Jingning Zhang, Diptavo Dutta, Anna Kottgen, Adrienne Tin, Pascal Schlosser, Morgan E. Grams, Benjamin Harvey, CKDGen Consortium, Bing Yu, Eric Boerwinkle, Josef Coresh, Nilanjan Chatterjee. Plasma proteome analyses in individuals of European and African ancestry identify cis-pQTLs and models for proteome-wide association studies. Nature Genetics 54.5 (2022): 593-602. [Puslished manuscript]

Keenan A. Walker, Jingsha Chen, Jingning Zhang, Myriam Fornage, Yunju Yang, Linda Zhou, Morgan E. Grams et al. Large-scale plasma proteomic analysis identifies proteins and pathways associated with dementia risk. Nature Aging 1, no. 5 (2021): 473-489. [Puslished manuscript]

Eugene P. Rhee, Aditya Surapaneni, Zihe Zheng, Linda Zhou, Diptavo Dutta, Dan E. Arking, Jingning Zhang, ThuyVy Duong, Nilanjan Chatterjee, Shengyuan Luo, Pascal Schlosser, Rupal Mehta, Sushrut S. Waikar, Santosh L. Saraf, Tanika N. Kelly, Lee L. Hamm, Panduranga S. Rao, Anna V. Mathew, Amanda H. Anderson, Chi-yuan Hsu, Afshin Parsa, Ramachandran S. Vasan, Paul L. Kimmel, Clary B. Clish, Josef Coresh, Harold I. Feldman, Morgan E. Grams. Trans-ethnic Genome-wide Association Study of Blood Metabolites in the Chronic Renal Insufficiency Cohort (CRIC) Study. Kidney international 101.4 (2022): 814-823. [Puslished manuscript]

Manuscripts Under Revision

Haoyu Zhang, Jianan Zhan, Jin Jin, Jingning Zhang, Thomas U Ahearn, Zhi Yu, Jared O’Connell, Yunxuan Jiang, Tony Chen, Montserrat Garcia-Closas, Xihong Lin, Bertram L Koelsch, Nilanjan Chatterjee, 23andMe Research Team. Novel Methods for Multi-ancestry Polygenic Prediction and their Evaluations in 3.7 Million Individuals of Diverse Ancestry. Accepted by Nature Genetics. [bioRxiv]

Jingning Zhang, Jianan Zhan, Jin Jin, Cheng Ma, Ruzhang Zhao, Jared O’ Connell, Yunxuan Jiang, 23andMe Research Team, Bertram L Koelsch, Haoyu Zhang, Nilanjan Chatterjee. An ensemble penalized regression method for multi-ancestry polygenic risk prediction. [bioRxiv]

Pascal Schlosser, Jingning Zhang, Hongbo Liu, Aditya L. Surapaneni, Eugene Rhee, Dan Arking, Bing Yu, Eric Boerwinkle, Paul Welling, Nilanjan Chatterjee, Katalin Susztak, Josef Coresh, Morgan E. Grams. Integrated Transcriptome- and Proteome-wide Association Studies reveals determinants of kidney function and damage.

Jin Jin, Jianan Zhan, Jingning Zhang, Ruzhang Zhao, 23andMe Research Team, Steven Buyske, Christopher Gignoux, Christopher Haiman, Eimear E. Kenny, Charles Kooperberg, Kari North, Genevieve Wojcik, Haoyu Zhang, Nilanjan Chatterjee. ME-Bayes SL: Enhanced Bayesian Polygenic Risk Prediction Leveraging Information across Multiple Ancestry Groups.

Manuscripts in Preparation

Jingning Zhang*, Diptavo Dutta*, Josef Coresh, Montserrat Garcia-Closas, Bing Yu, Eric Boerwinkle, Elizabeth Platz, Corinne Joshu, Aaron Folsom, Nilanjan Chatterjee. Proteomic Mediation of Genetic Risks of Cancers. 2022+ (*Co-first author)

Jingning Zhang, Nilanjan Chatterjee. Theoretical quantification of the accuracy of multi-ancestry polygenic risk scores. 2022+